diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
new file mode 100644
index 0000000000000000000000000000000000000000..4fe9996b9695a1aef92842de301509b4c58556e1
--- /dev/null
+++ b/.pre-commit-config.yaml
@@ -0,0 +1,7 @@
+- repo: https://github.com/Yelp/detect-secrets.git
+ #git@github.com:Yelp/detect-secrets
+ rev: v0.13.0
+ hooks:
+ - id: detect-secrets
+ args: ['--baseline', '.secrets.baseline']
+ # exclude: .*/tests/.*
diff --git a/.secrets.baseline b/.secrets.baseline
new file mode 100644
index 0000000000000000000000000000000000000000..8637f8a80c4060c5243e95f5a1e09f6896ae9725
--- /dev/null
+++ b/.secrets.baseline
@@ -0,0 +1,2181 @@
+{
+ "exclude": {
+ "files": "frontend/package-lock.json|^.secrets.baseline$",
+ "lines": null
+ },
+ "generated_at": "2020-01-10T13:53:44Z",
+ "plugins_used": [
+ {
+ "name": "AWSKeyDetector"
+ },
+ {
+ "name": "ArtifactoryDetector"
+ },
+ {
+ "base64_limit": 3.5,
+ "name": "Base64HighEntropyString"
+ },
+ {
+ "name": "BasicAuthDetector"
+ },
+ {
+ "hex_limit": 3,
+ "name": "HexHighEntropyString"
+ },
+ {
+ "name": "JwtTokenDetector"
+ },
+ {
+ "keyword_exclude": null,
+ "name": "KeywordDetector"
+ },
+ {
+ "name": "MailchimpDetector"
+ },
+ {
+ "name": "PrivateKeyDetector"
+ },
+ {
+ "name": "SlackDetector"
+ },
+ {
+ "name": "SoftlayerDetector"
+ },
+ {
+ "name": "StripeDetector"
+ }
+ ],
+ "results": {
+ ".gitlab-ci.yml": [
+ {
+ "hashed_secret": "7108e8d092c87038926f21e59c97942d3eb98c63",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 29,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ ".idea/compiler.xml": [
+ {
+ "hashed_secret": "0b8d01c02f2240b3ee003fad5f363a4fdf43db36",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 3,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ ".idea/modules.xml": [
+ {
+ "hashed_secret": "e214f6735f68ae8b517a0fb7ea1bcf5999a96cb3",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 3,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ ".idea/vcs.xml": [
+ {
+ "hashed_secret": "8a5c21bf9d873ea850214c2841dde1c762679fb9",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 3,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "CONTRIBUTING.md": [
+ {
+ "hashed_secret": "cd944b0e6673e265b8136de65bc350231cd4ee19",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 37,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/build.gradle.kts": [
+ {
+ "hashed_secret": "a8cc3e6575cfcb001213d2d4a539446e338c99f3",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 30,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "72f190d7abc405337b349f4d86ce350c5e4527e0",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 61,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "30193f9b586d5e62e446374763cc61f7e9cea0cd",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 64,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/brapi/v1/GermplasmController.java": [
+ {
+ "hashed_secret": "be2d7d4e773b648842c7a3bfd9aceb2eff115a41",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 62,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "cd856c7d2fb312ad7f86b753aed6dea369dbfbe6",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 87,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/brapi/v1/LocationController.java": [
+ {
+ "hashed_secret": "7c8781bb6d329df5d6b4105e6b15d2f223fa9215",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 51,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/brapi/v1/ObservationVariableController.java": [
+ {
+ "hashed_secret": "b4fda7fe6dab054568e7bef09735e12f78374aa4",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 55,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/brapi/v1/PhenotypeController.java": [
+ {
+ "hashed_secret": "5d329f70db15153f9b756e1d21eb78bc69690970",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 38,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/brapi/v1/ProgramController.java": [
+ {
+ "hashed_secret": "558a9d41b9ca2d7971a693a910e573ef841faec5",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 63,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/brapi/v1/StudyController.java": [
+ {
+ "hashed_secret": "a894aca407157e8fdf128bd0430a3e95d8b5eafa",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 79,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "cbda3d243a0cef3b507c9676b11df75675b74200",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 101,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/faidare/v1/DataDiscoveryController.java": [
+ {
+ "hashed_secret": "8af6d48a4477835bdc1968cf9af537cee0e160bb",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 26,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/faidare/v1/GnpISGermplasmController.java": [
+ {
+ "hashed_secret": "bf323cc69121867f99337930dc946edce615f2ab",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 28,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/api/faidare/v1/XRefDocumentController.java": [
+ {
+ "hashed_secret": "4bfe834790cf990f01c1f8f482eb8d8e31098781",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 32,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/config/MimeMappingServletCustomizer.java": [
+ {
+ "hashed_secret": "3bcfe3365c3b3720606044fefc489c8e0fcaa655",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 18,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/config/RestClientConfig.java": [
+ {
+ "hashed_secret": "d62d396f1dc69c7308cba02c0f54a68022e85077",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 19,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/criteria/GermplasmAttributeCriteria.java": [
+ {
+ "hashed_secret": "344a627efbdf17dfc804f04e2eb1626843c0e825",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 19,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/criteria/GermplasmAttributeListCriteria.java": [
+ {
+ "hashed_secret": "f9266e68dab0d92d296a03bc40be686705fcddcf",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 19,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/criteria/GermplasmGETSearchCriteria.java": [
+ {
+ "hashed_secret": "344a627efbdf17dfc804f04e2eb1626843c0e825",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 19,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/criteria/GermplasmPOSTSearchCriteria.java": [
+ {
+ "hashed_secret": "344a627efbdf17dfc804f04e2eb1626843c0e825",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 19,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "38d9070c435d5fc2e1186bf2c4ff4ddd39dc60c7",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 34,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/criteria/ObservationUnitCriteria.java": [
+ {
+ "hashed_secret": "344a627efbdf17dfc804f04e2eb1626843c0e825",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 22,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "921bd972137666fa4e9467b44243e0d5d3cee1fd",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 28,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "16446a8fe4999a2dc3381b100b249a63e8bc82af",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 38,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "fe4bdf7ff8c0bde6ff4a5fe73c3df64686b59da0",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 46,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/criteria/StudySummaryCriteria.java": [
+ {
+ "hashed_secret": "e02307234404d08f6346900b32b17ca90f9c4ed8",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 34,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "f98c96dfd0a6ae593449b5dd101af7838d2e4837",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 37,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/data/germplasm/GermplasmAttributeValueListVO.java": [
+ {
+ "hashed_secret": "9b4ea0964706f977148ec989e7373d9622613547",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 15,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/data/study/StudyDetailVO.java": [
+ {
+ "hashed_secret": "f98c96dfd0a6ae593449b5dd101af7838d2e4837",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 27,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/data/study/StudySummaryVO.java": [
+ {
+ "hashed_secret": "e02307234404d08f6346900b32b17ca90f9c4ed8",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 24,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "f98c96dfd0a6ae593449b5dd101af7838d2e4837",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 24,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/datadiscovery/criteria/DataDiscoveryCriteriaImpl.java": [
+ {
+ "hashed_secret": "d0346392c0a55403e2f845c277b44f3c2dd75356",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 29,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/domain/xref/XRefDocumentSearchCriteria.java": [
+ {
+ "hashed_secret": "115a9779753641744ba0e30c3ff8586c823b6f7e",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 18,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/repository/es/GermplasmRepositoryImpl.java": [
+ {
+ "hashed_secret": "344a627efbdf17dfc804f04e2eb1626843c0e825",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 113,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/repository/es/StudyRepositoryImpl.java": [
+ {
+ "hashed_secret": "f98c96dfd0a6ae593449b5dd101af7838d2e4837",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 104,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/java/fr/inra/urgi/faidare/service/es/GermplasmServiceImpl.java": [
+ {
+ "hashed_secret": "1d140def038cb8ed1fc9dcf662d2851a64fa277f",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 50,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/main/main.iml": [
+ {
+ "hashed_secret": "c110336700b48d6b8066da6634b50b487a565aeb",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 3,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/api/brapi/v1/GermplasmControllerTest.java": [
+ {
+ "hashed_secret": "c15d3794985c7ab60af51a795f4b57282d9b4b34",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 67,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "e3e3bf1403bb17b4b2c39c02a6b3d13587375293",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 79,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "48ce2710c12606c88a1a81c172f027f634a74153",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 89,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "8aeabf21d3d9e270937890493769a88db1669c1c",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 114,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "ce337d16b8697ffeb99c66000dee8485f1074f63",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 127,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/api/brapi/v1/LocationControllerTest.java": [
+ {
+ "hashed_secret": "35d95b09e25d6d19c54cb7240aac15350e726c94",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 72,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "bcf8c4f57ee439fa7ea0ec150c49872d82914365",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 81,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/api/brapi/v1/ObservationVariableControllerTest.java": [
+ {
+ "hashed_secret": "9cb9facf9b92013a8c72e6b4a624995806d66725",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 79,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/api/brapi/v1/StudyControllerTest.java": [
+ {
+ "hashed_secret": "8fe2ee839ae8228daae8cece3d0af0f7acf036fe",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 90,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "c336d8b00c60ad71464c59358ab672d9d3447da3",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 99,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/api/faidare/v1/GnpISGermplasmControllerTest.java": [
+ {
+ "hashed_secret": "bf323cc69121867f99337930dc946edce615f2ab",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 88,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "8aeabf21d3d9e270937890493769a88db1669c1c",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 101,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/elasticsearch/ESRequestFactoryTest.java": [
+ {
+ "hashed_secret": "0e141107c2bb4a5e362dacd4e22a34d85bb27645",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 38,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "264ee2b7a5a98070211e674d8dc3552e8ee9c710",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 54,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "c8ed7556a8de96abda04570a47d3f00ff1442f2b",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 55,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "4c64a7b1f3847d8fd00009414b1ce82cc7ef0893",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 56,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/filter/AngularRouteFilterTest.java": [
+ {
+ "hashed_secret": "a894aca407157e8fdf128bd0430a3e95d8b5eafa",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 71,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "6c1506ad2aa831c1570ee734eb7b70ab2ec9cb35",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 72,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "7de336b133a2498411ffb4fa93677438c1c80ea6",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 93,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/repository/es/GermplasmAttributeRepositoryTest.java": [
+ {
+ "hashed_secret": "cb327c48991c34e79f3a7af62bc2a9031f82b116",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 60,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "e5cb5adf310f6f0556959918af7276d56869d10e",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 90,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "backend/src/test/java/fr/inra/urgi/faidare/repository/es/GermplasmRepositoryTest.java": [
+ {
+ "hashed_secret": "38d9070c435d5fc2e1186bf2c4ff4ddd39dc60c7",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 309,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "78fcfa298d9d9d2aebf2faebf108a6d324195a64",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 319,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "ad7ecf643f26cfa9a4fd88db91f6765760853f90",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 319,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "e80e91f65211b705f79ddaff7b9188730cdafffc",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 319,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "344a627efbdf17dfc804f04e2eb1626843c0e825",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 330,
+ "type": "Base64 High Entropy String"
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+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 40,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "frontend/src/karma.conf.js": [
+ {
+ "hashed_secret": "d7694a426ff808865ca916828a5730bd1105b6b6",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 11,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "d4d4181e6a92d9b5e73ea9dda634789acc42ea82",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 12,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "cb375b8cc3f276deb0911c7094ff23f4c3dd2a1e",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 13,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "86dd30d2e45c492bc93440884519389bebf9ea30",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 14,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "10555ed5fc7ed0db9928293dd7d0988b9aeeb9cb",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 40,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "frontend/src/tsconfig.app.json": [
+ {
+ "hashed_secret": "fbaa0ff6a5fe0b0438ba224fdceb3a8e16bb7e76",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 3,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "frontend/src/tsconfig.spec.json": [
+ {
+ "hashed_secret": "fbaa0ff6a5fe0b0438ba224fdceb3a8e16bb7e76",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 3,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "frontend/tsconfig.json": [
+ {
+ "hashed_secret": "3727a89559ed80ed67dae8e1d30f486c21e3cfe0",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 2,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "fbaa0ff6a5fe0b0438ba224fdceb3a8e16bb7e76",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 3,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "19f23993c1d256312bc19859d34fc01e2629cdd9",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 12,
+ "type": "Base64 High Entropy String"
+ }
+ ],
+ "frontend/tslint.json": [
+ {
+ "hashed_secret": "295d2ec5e73657052924c7cbfc2c362d584092b3",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 4,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "90a34b86f53efef84ffdbee20596b062a4b95bd0",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 21,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "186215b7bbaba3687b364cca126c9345d2c98f6d",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 22,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "ae67be92eb6a067b1d71891f27c6445ec539f5ce",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 32,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "ec5618cd83fb4745843a58de5f8749facf0c55ca",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 46,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "c016b9c5a1df7f785d6f4e087820d36e5bd0f148",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 63,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "e4eaff516ae0c4b146f87a9a6421f427daecf793",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 64,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "035acc07f3bb679c845009f4bc1c4d26fb92990a",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 65,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "1cda9627fb897773364c118e27b76f401371073c",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 68,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "fe3c1b65cd14cc0891d2337b20cfad9812237868",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 74,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "27a882c91e92a8872c7b6e85c443edc721f19c21",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 80,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "1fea56a00def423e11248ba578c854f5cd2c30c8",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 89,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "22ae753cb2ff3618160dc46abd823439432bcfbb",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 92,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "77d57e420e82c7fe88ac7bf83f712bd306cb4514",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 94,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "5377075e9f1f3303124270dc429b3592cd642ef8",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 95,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "d4e3be43e763c3e766fde194ce789d8737849605",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 99,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "dd67dc07fbd13faea9b61655035b2ff0f831dd34",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 100,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "649dc3f39fb80e397781867b85350b4c0c943bfa",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 118,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "16c8584a6705f6e38f4276ebee046e8c158390c9",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 124,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "ef6cb40a0febd446b2cfdfe423f3c21c9928825b",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 127,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "2aa4906f7b7b4bd9b89e5968e6e96c6857b1abf0",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 128,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "ee2cce11b4c556e7a958eaec001d8d5d646863c9",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 130,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "e522b5699211259613ebfbf7a4e2f8c4b98bd197",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 131,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "66cae49608281f789250e6bdbd8f1693107591c4",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 144,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "2acdddd4d7b888ef8ab0da48dcfefd85bf78ef4d",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 147,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "91c737c45daa44263a9d8601b24dcf75fea597db",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 151,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "6382da7aea1e6ac7d050126427a28a9bb76e0f4c",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 152,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "bc43bd93e86f40ca22c288a2ce0b8913ec2989f4",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 153,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "0665cd5d2322066bfcc3126b4f687f8d91743b4f",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 155,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "5f0a8f69aec0e800c0f10b9cb907f03138cac4c5",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 159,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "58e6d516d2effc27a97e7f6e9a251162247430c5",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 164,
+ "type": "Base64 High Entropy String"
+ },
+ {
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+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 166,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "af96939de7d02feb09a9c26ba02e0c84bf538dec",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 169,
+ "type": "Base64 High Entropy String"
+ },
+ {
+ "hashed_secret": "1b465000db5b4a33305981f63c0aaa66c41ef660",
+ "is_secret": false,
+ "is_verified": false,
+ "line_number": 170,
+ "type": "Base64 High Entropy String"
+ }
+ ]
+ },
+ "version": "0.13.0",
+ "word_list": {
+ "file": null,
+ "hash": null
+ }
+}
diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
index a5d7d2ddaffc191b3ac38931a8a153211cca929d..a304b2e113cef70c1d305120bf2c968d885bb2c5 100644
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@@ -6,50 +6,62 @@
* One stable & protected [master](/) branch
* Feature branches for development following the pattern `[dev_type]/[dev_name]` (ie. `chore/explaining_how_to_merge`) where `[dev_type]` can be:
- * fix (bug fixes)
- * feat (new feature)
- * style (style modification)
- * refactor (code refactoring)
- * chore (base maintenance such as version bump)
- * test (for anything related to tests)
+ * fix (bug fixes)
+ * feat (new feature)
+ * style (style modification)
+ * refactor (code refactoring)
+ * chore (base maintenance such as version bump)
+ * test (for anything related to tests)
### Commit & branches merge
+
* Commit name should follow pattern `[dev_type]: [brief description of the commit, lower than 50 characters]. [JIRA-KEY]`
* All branches must be merged via a `merge request` (MR)
-* Merge requests should be created at the time of the branch creation in order to allow reviewer to comment and follow the developments, specify the `WIP` tag in the MR name (go further: *[feature highlight WIP](https://about.gitlab.com/2016/01/08/feature-highlight-wip/)*).
- Example:
- ```
- git checkout -b chore/explaining_how_to_merge
- git push --set-upstram origin chore/explaining_how_to_merge
- ```
- Returns a link for creating the merge request easily:
- ```
- Total 0 (delta 0), reused 0 (delta 0)
- remote:
- remote: To create a merge request for chore/explaining_how_to_merge, visit:
- remote:   https://forgemia.inra.fr/urgi-is/faidare/merge_requests/new?merge_request%5Bsource_branch%5D=chore/explaining_how_to_merge
- remote:
- To forgemia.inra.fr:urgi-is/faidare.git
- * [new branch]      chore/explaining_how_to_merge -> chore/explaining_how_to_merge
- La branche 'chore/explaining_how_to_merge' est paramétrée pour suivre la branche distante 'chore/explaining_how_to_merge' depuis 'origin'.
- ```
+* Merge requests should be created at the time of the branch creation in order to allow reviewer to comment and follow the developments, specify the `WIP` tag in the MR name (go further: *[feature highlight WIP](https://about.gitlab.com/2016/01/08/feature-highlight-wip/)*). Example:
+
+ ```sh
+ git checkout -b chore/explaining_how_to_merge
+ git push --set-upstram origin chore/explaining_how_to_merge
+ ```
+
+ Returns a link for creating the merge request easily:
+
+ ```sh
+ Total 0 (delta 0), reused 0 (delta 0)
+ remote:
+ remote: To create a merge request for chore/explaining_how_to_merge, visit:
+ remote:   https://forgemia.inra.fr/urgi-is/faidare/merge_requests/new?merge_request%5Bsource_branch%5D=chore/explaining_how_to_merge
+ remote:
+ To forgemia.inra.fr:urgi-is/faidare.git
+ * [new branch]      chore/explaining_how_to_merge -> chore/explaining_how_to_merge
+ La branche 'chore/explaining_how_to_merge' est paramétrée pour suivre la branche distante 'chore/explaining_how_to_merge' depuis 'origin'.
+ ```
* A `git rebase` is strongly recommanded before merging a MR
- * [Git rebase official documentation](https://git-scm.com/book/en/v2/Git-Branching-Rebasing)
- * [How to keep a clean history](https://about.gitlab.com/2018/06/07/keeping-git-commit-history-clean/)
+ * [Git rebase official documentation](https://git-scm.com/book/en/v2/Git-Branching-Rebasing)
+ * [How to keep a clean history](https://about.gitlab.com/2018/06/07/keeping-git-commit-history-clean/)
* Merge requests should be reviewed by at least 2 colleagues
* Continuous Integration is launched automatically by Gitlab on each commit push or merge request creation.
## Data management
+
* Git LFS (look at [how to install](https://git-lfs.github.com/)) feature is enabled on this project in order to store JSON test data
* Another dedicated Git LFS project (internal only) will be created to handle all private + public JSON files
* **TODO**: refer to the good Git LFS project in the CI settings for indexing the relevant data into the relevant Elasticsearch indices/instances
* the JSON files generation will be handled by an external ET (extract/transform) tool.
## Development environment
+
* Look at the [README.md](README.md) for installation and execution instructions.
* Recommanded IDE is [Intellij IDEA](https://www.jetbrains.com/idea/)
* Use linting to apply code standards within the team:
- * Use `ng lint` (for frontend code only)
- * Use [Checkstyle](https://checkstyle.org/) and [PMD](https://pmd.github.io/) (**TODO**: implement) for backend (+frontend?) code
+ * Use `ng lint` (for frontend code only)
+ * Use [Checkstyle](https://checkstyle.org/) and [PMD](https://pmd.github.io/) (**TODO**: implement) for backend (+frontend?) code
* All runtime variables should be externalized from the code in order to facilitate the CI management (database host/port, application name, public URL, JSON location...) and the adoption by partners
+* Configure [Yelp's detect-secrets](https://github.com/Yelp/detect-secrets) pre-commit hook to track any high entropy strings, which could possibly be leaked secrets.
+ * Run: `pip3 install pre-commit detect-secrets --user && pre-commit install` to configure you dev environment.
+ * If a secret is detected:
+ * either fix it (because it must not be committed)
+ * or run:
+ * `detect-secrets scan --update .secrets.baseline` to update the secret baseline, then
+ * `detect-secrets audit .secrets.baseline` to tag it as a false positive if relevant.